Agreed. I hear a lot of people say that they don't care about burning an option year or that they don't care about losing a year of control that won't affect the team for 6 more years, but these things often have a way of coming back to haunt the team.
If the situation is such that the need is dire, then by all means, call up the player. Otherwise, don't rush it or risk it.
All that said, I was against calling up Benintendi before September, but it seems that management made the correct call there, Beni's current injury notwithstanding.